This freeware program visualizes pathways (KEGG, BioCarta, GenMAPP, ...). The user has the possibility to display any kind of quantitative data from gene and protein experiments directly within the pathways (colours represent the value). The linking between the pathway items and the experiment...
|License: Freeware||Size: 4.54 MB||Download (294): Advanced Pathway Painter Download|
Internet Toobar - Flagstone Pathway Installation Info - Flagstone Patio info - This Tool Bar have search option by which you can search web easilly. You can easily get Twitter messeges right on your Tool bar. You can also listen Radio on a click. you can tune RAP & Blues Radio stations. we have...
|License: Freeware||Size: 1.52 MB||Download (28): Flagstone Pathway Download|
BioPAX - A Data Exchange Format for Biological Pathway Information
Platforms: Windows, Mac, Linux
|License: Freeware||Size: 6.57 MB||Download (27): Biological Pathway Exchange Language Download|
A Tool that manages Pathway Retrieval, Visualization and Analysis. Import a Gene or Protein Set from any Excel file. Find matching Pathways from KEGG. Integrate, visualze and analyze your Data in Seconds with interactive Force-directed Layout .
|License: Freeware||Size: 9.01 MB||Download (18): PaViAn Download|
Pathway is a semantic browser that tracks your steps through MediaWiki sites such as Wikipedia. It represents visited pages by nodes, which are interconnected to form the trail that you've made. This enables you to keep a clear overview of your wiki explorations.
|License: Freeware||Download (78): Pathway Download|
Collect all the shapes by constructing a pathway to match your creates shapes with the ones inside each level. The levels will get more complicated as you progress through the game. There is also a walkthrough available that will guide you through each level for the players that got stuck, have fun!
|License: Freeware||Size: 2.89 MB||Download (78): Mad Shapes Download|
This project implements a Cytoscape plugin for viewing and manipulating pathway maps for metabolic models created by the Model SEED (http://www.theseed.org/models). See the 'Files' area for README. See Project Homepage for Tutorial.
Platforms: Windows, Mac
|License: Freeware||Size: 3.21 MB||Download (28): CytoSEED:Cytoscape plugin for Model SEED Download|
The Edinburgh Pathway Editor (EPE) is a tool and framework that allows the drawing and manipulation of Biological Networks, such as signalling or matabolic pathways. The editor supports several notations including SBGN and Cytoscape notations.
Platforms: Windows, Mac
|License: Freeware||Size: 94.53 MB||Download (27): EPE Download|
The goal of this project is to make a biologic pathway simulation / emulation application. The ultimate goal is to feed different file types to the application and configure a pathway and its behaviour.
Platforms: Windows, Mac, Linux
|License: Freeware||Size: 9.6 MB||Download (29): EPPA (Emulate ProteinPathway Application Download|
|License: Freeware||Size: 27.66 MB||Download (27): SBMLforge Download|
ViennaData is a C++ library that allows to separate intrinsic properties of a class from data associated to objects of that class. This allows to write code that is much more reusable than traditional designs.
Platforms: Windows, Mac, BSD, Linux
|License: Freeware||Size: 517.54 KB||Download (27): ViennaData Download|
The Empirical Mode Decomposition is a technique to decompose a given signal into a set of elemental signals called Intrinsic Mode Functions. The Empirical Mode Decomposition is the base of the so-called d-deDUHilbert-Huang Transformd-deDt that comprises also a Hilbert Spectral Analysis and an...
|License: Freeware||Size: 10 KB||Download (21): Empirical Mode Decomposition Download|
This software has been realized at the CNS Technology Lab at Boston University - http://techlab.bu.edu. The main author of this software is Chaitanya Sai ( http://techlab.bu.edu/members/sai/ ).CONFIGR (CONtour FIgure GRound) is a computational model based on principles of biological vision that...
|License: Freeware||Size: 256 KB||Download (19): CONFIGR (CONtour FIgure and GRound) Download|
TYPECAST and TYPECASTX are mex functions intended to mimic the MATLAB intrinsic typecast function with extensions. These C-mex versions of typecast differs from the intrinsic typecast in the following important aspects: Intrinsic typecast------------------Type of copy: Deep Data CopyAllows...
|License: Freeware||Size: 10 KB||Download (18): typecast and typecastx C-mex functions Download|
Reshapes an array like the MATLAB intrinsic reshape function. But reshape0 does not require that the total number of elements must remain the same. If the new array is larger, then it will be zero or blank padded. If the new array is smaller, then it will be a truncated...
|License: Freeware||Size: 10 KB||Download (18): reshape0, reshaping with padding or truncating Download|
The PHP JPEG Metadata Toolkit is free and Open Source PHP Project designed to allow manipulation of many types of metadata that reside in a JPEG image file. Five types of metadata that can be accessed by this project:- EXIF, DCF & TIFF/EP including makernotes: Contains Digital Camera Settings....
|License: Freeware||Size: 296.96 KB||Download (19): The PHP JPEG Metadata Toolkit Download|
PathVisio is a tool for displaying and editing biological pathways. In a sense PathVisio lets you draw pathways as you would in any drawing program, like PowerPoint or Photoshop. But the difference is that PathVisio can understand the biological context of a pathway, because you can link...
|License: Freeware||Size: 10.24 KB||Download (16): PathVisio Download|
SVG support is one of the most requested features for . There are two options, either SVG import for manipulating SVG graphics within as described in Issue:2497, or embedding SVG graphics "display-only" within documents as described in Issue:49991. Both options have their intrinsic benefits and...
|License: Freeware||Size: 5.6 MB||Download (18): SVG Import Download|
GeXpert is an expert system that can be used for genetics and metabolic pathway analysis. GeXpert can help Biotechnologists do their work faster, reducing the time required for performing, analyzing and storing the results of Bioinformatics research.
|License: Freeware||Size: 41.58 MB||Download (17): GeXpert Download|
Displays graphs of algebraic functions in a variety of forms. These include polar and cartesian co-ordinates, parametric and intrinsic functions. A wide range of functions are built-in, from simple trig and hyperbolic functions to things such as the ceil and gamma functions. On-screen HTML help...
|License: Freeware||Size: 150 KB||Download (291): Descartes Download|